Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926371.1_cds_XP_016474413.1_66443
CDS Infomation

[gene=LOC107796184] [db_xref=GeneID:107796184] [protein=lysosomal Pro-X carboxypeptidase-like] [protein_id=XP_016474413.1] [location=join(12899..13300,13401..13587,13691..13824,14576..14688,14808..14931,15154..15303,15435..15590,16014..16093,16184..16233,17446..17585)] [gbkey=CDS]
Sequence

ATGGCATCTCCTCCGCCATTTCTATACCCTCTTCTCATACTGATTATCTCATTTTTATGG
CAAGCATCAGCTATTCAACTGCCTTCAACAAATGGTGCTCGCTATCTGGGCAATTTCTGG
AGCTCAAGCAAAACACTTCCACTTGTTGGTAAAAGTAAAGCCCCGAAGTACGAGTACGAG
ACCAAATATTTTCAGCAGAAGCTGGATCACTTCAGCTTCGCTGATCTACCTTCGTTTCAA
CAGCGTTACCTGATCAATACCCAACACTGGGTGGGTCCCTCTCGCTTGGGGCCCATCTTC
CTCTACTGTGGCAATGAAGGGGATATCGAATGGTTCGCTGCCAATACTGGCTTCGTCTGG
GAAATTGCCCCTCGTTTCGGTGCCTTGGTTATCTTCCCCGAGCATCGATACTATGGGGAG
TCAATGCCGTATGGAAGTAAGGAAGAAGCATATAAGAATGCTACCACTTTATCGTATCTA
ACAGCTGAACAAGCACTGGCTGATTATGCCGTGTTAATCACTGAGCTTAAAAGAAATTTA
TCTGCACAGGCATGCCCTGTTGTGTTATTTGGTGGATCATATGGTGGAATGCTTGCAGCT
TGGATGAGGCTCAAATATCCCCATATTTCCATTGGTGCACTTGCTTCTTCTGCACCAATT
CTTCAGTTTGAAGATCTTGTGCCACCTGAAACCTTTTATAACATTGTCTCCAATGATTTC
AAGCGTGAGAGTATGAGTTGCTTTAACATTATCAAAGAGTCTTGGGATGTGATTAACTCG
GTAGGACAGATAAATGGTGGACTTGCACAACTGACAAAGACTTTCCACCTCTGTAGGAAA
CTGGAGAGTGTTGACGGCTTGTCTAACTGGTTAGAATCCGCTTATAGTTACTTGGCAATG
GCCAACTACCCCTATCCTACCGGCTTCTTGATGCCTTTACCTGGAAGCCCAATAAAAGAG
GTATGTAGGAAGATTGATGGTTTGCCTGATGGTGCTAGTGTCCTGCAGCGTATATTTGAA
GGAATTAATGTCTATTATAATTACACTGGGAAAGTTGACTGTTTCAATCTGGACGATGAT
CCTCATGGTATGAGTGGTTGGGATTGGCAGGCATGCACTGAGATGGTTATGCCTATGGCA
AGTAACAAGACGACTAGTATGTTTCCGGAGTTTTATTATGACCCAAAGTTGAATGAAGAG
CAGTGTTTGAAAGATTTTCATGTCAAACCGAGGCCGACATGGATAACAACTGCATTTGGC
GGACATGCATTCAAGAGTGCGCTAAAAGCTTTTGGGAGTAACATCATATTCTCGAATGGC
CTGTTAGATCCCTGGAGTGGTGGCAGTGTTCTGGAGGATGTGTCAGAAACTATAGTTGCT
TTGATTACTGAGAAAGGTGCCCATCACTTAGATCTACGTGCAGCAACAGCTGAAGATCCT
GATTGGCTTCTGGAGCAAAGGTCAAGCGAGATTAAGCTGATCAGGGGCTGGTTGGACAAG
TACTATGATGAAAAGAAGGCAACTTTCAGCATGTAG

Peptide Sequence

PEP ID

XP_016474413.1
PEP Infomation

PREDICTED: lysosomal Pro-X carboxypeptidase-like [Nicotiana tabacum]
Sequence

MASPPPFLYPLLILIISFLWQASAIQLPSTNGARYLGNFWSSSKTLPLVGKSKAPKYEYE
TKYFQQKLDHFSFADLPSFQQRYLINTQHWVGPSRLGPIFLYCGNEGDIEWFAANTGFVW
EIAPRFGALVIFPEHRYYGESMPYGSKEEAYKNATTLSYLTAEQALADYAVLITELKRNL
SAQACPVVLFGGSYGGMLAAWMRLKYPHISIGALASSAPILQFEDLVPPETFYNIVSNDF
KRESMSCFNIIKESWDVINSVGQINGGLAQLTKTFHLCRKLESVDGLSNWLESAYSYLAM
ANYPYPTGFLMPLPGSPIKEVCRKIDGLPDGASVLQRIFEGINVYYNYTGKVDCFNLDDD
PHGMSGWDWQACTEMVMPMASNKTTSMFPEFYYDPKLNEEQCLKDFHVKPRPTWITTAFG
GHAFKSALKAFGSNIIFSNGLLDPWSGGSVLEDVSETIVALITEKGAHHLDLRAATAEDP
DWLLEQRSSEIKLIRGWLDKYYDEKKATFSM

Transcript Sequence

Gene sequence data has not been registered.